Free Printable: Low Carb & Keto Food List
Get It NowIt’s hard to believe that these keto cupcakes recipe only has 6 grams net carbs per serving! My low carb keto chocolate cupcakes are full of rich, chocolate flavor, but without all the sugar and flour that normally come along with it. They’re just as amazing as keto chocolate cake or even vanilla keto cake, but in a portion-controlled package. Whenever you find yourself with a chocolate craving, these treats should be at the top of your list.
Why You’ll Love This Keto Cupcake Recipe

- Delicate, moist texture
- Sweet, chocolaty flavor
- Easy to make in one bowl
- Ready in 30 minutes
- Keto-friendly and gluten-free
- 6 grams net carbs per serving (including the frosting!)


Ingredients & Substitutions
Here I explain the best ingredients for keto chocolate cupcakes, what each one does, and substitution options. For measurements, see the recipe card.
- Wholesome Yum Blanched Almond Flour – Choosing high quality almond flour is a must for moist keto cupcakes. It needs to be blanched and finely ground like the Wholesome Yum brand. Do not use almond meal, which will yield a grainy result.
- Cocoa Powder – Turns plain keto cupcakes into chocolate ones! Make sure to select one that’s unsweetened, and Dutch-processed to avoid bitterness — this one is one of my favorites.
- Baking Powder – Helps the cupcakes rise. Don’t confuse this with baking soda, which is not the same thing.
- Sea Salt – Salt in baked goods helps bring out the sweetness.
- Butter – Adds flavor and richness. Ghee or coconut oil can work for reduced-dairy or dairy-free substitutes, but the texture will be different.
- Besti Monk Fruit Allulose Blend – The best sweetener for virtually all keto desserts, because it not only tastes and bakes like sugar, it also makes them very moist. Other sugar alternatives (including erythritol, stevia, and other brands of monk fruit sweetener) will yield more dry results, but if you still want to substitute, check my sweetener conversion chart.
- Eggs – A big part of baked goods, the eggs help to add structure and lift. I have not tested flax eggs to see if they would work in this keto cupcake recipe.
- Almond Milk – You can use store bought almond milk (as long as it’s unsweetened), or homemade almond milk. Other keto milk, such as coconut milk beverage (the liquid kind from a carton, not the thick kind from a can) or watered down heavy cream, would also work.
- Vanilla Extract – Helps to bring out the chocolate and sweetness.
- Chocolate Keto Frosting – The best keto cupcakes need this frosting! You could also substitute keto buttercream frosting if you like.
- Keto Sprinkles – Optional, but they add a beautiful finish.
How To Make Keto Cupcakes
This section shows how to make keto chocolate cupcakes, with step-by-step photos and details about the technique, to help you visualize it. For full instructions, including amounts and temperatures, see the recipe card.
- Beat butter and Besti. Using an electric hand mixer in a large mixing bowl, beat butter and sweetener together until it’s fluffy and light yellow in color.
- Add dry ingredients. Beat in almond flour, cocoa powder, baking powder, and sea salt.
- Add wet ingredients. Beat in eggs, almond milk, and vanilla extract.
- Divide. Line your muffin tin with parchment liners like these first. Spoon the cupcake batter into the lined muffin cups. You want them almost full. (They will not rise as much as traditional cupcakes.)


TIP: Need to cut the carbs and calories more?
Make mini keto cupcakes instead by using a mini muffin tin! You’ll get double the amount of cupcakes.
- Bake. The cupcakes are done when a toothpick inserted into the center comes out clean.

- Frost. Let the cupcakes cool completely on a cooling rack, then frost with keto chocolate frosting.

Storage Instructions
- Store: Keep chocolate keto cupcakes in an airtight container at room temperature for 3-4 days.
- Freeze: Wrap each cupcake individually in plastic wrap to prevent freezer burn. (If you want to preserve the frosting shape, you can freeze them on a sheet pan first until solid, then wrap and place back in the freezer.) They will last 2-3 months this way. To thaw, simply leave them at room temperature until they thaw completely.

More Keto Cupcakes
If you love this keto cupcake recipe, you might also like some of these other low carb cupcake recipes:
- Sugar-Free Vanilla Cupcakes – The best gluten free keto cupcakes to make all spring and summer long – especially when the raspberries are perfect!
- Keto Chocolate Mug Cake – When you don’t have time to make this low carb chocolate cupcakes recipe, try my easy mug cake version that’s ready in a few minutes. It’s a faster version to keto cake.
- Piña Colada Cupcakes – This keto cupcake recipe is exclusive to the Wholesome Yum app, available for free on iPhone or Android.
Recommended Tools
- Hand Mixer – These keto cupcakes with almond flour are whipped up in a flash when you use an electric mixer. This is the one I have and I love it.
- Cupcake Liners – Cupcake liners are a must when making this low carb cupcakes recipe. These are the ones I use and love.
- Cupcake Pan – Obviously a must for my keto cupcake recipe. These pans are my favorite and I have each and every one.

Keto Cupcakes (Easy, Moist & Chocolaty)
This chocolate keto cupcakes recipe is super moist, rich, and sweet… all with simple ingredients like almond flour, butter and cocoa powder.
Instructions
[ See step photos ]Tap on the times in the instructions to start a kitchen timer.
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Preheat the oven to 350 degrees F (176 degrees C). Line 10 cups in a muffin tin with paper liners.
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In a large bowl, use a hand mixer to beat butter and sweetener together, until fluffy.
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Beat in almond flour, cocoa powder, baking powder, and sea salt.
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Beat in eggs, almond milk, and vanilla extract.
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Bake for 20-25 minutes, until a toothpick inserted in the center of a cupcake comes out clean.
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Allow muffins to cool completely, then frost with keto chocolate frosting (about 2 tablespoons frosting per cupcake).
Did you make it? Leave a review or tag me @wholesomeyum on Instagram!
Maya’s Recipe Notes
Serving size: 1 keto cupcake
I provide nutrition facts as a courtesy. Have questions about calculations or why you got a different result? Please see my nutrition policy.
Add Your Notes Your Notes
© Copyright Maya Krampf for Wholesome Yum. Please DO NOT SCREENSHOT OR COPY/PASTE recipes to social media or websites. We’d LOVE for you to share a link with photo instead.
Low Carb Keto Cupcakes Recipe

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121 Comments
Shruthi
1I was skeptical about using almond flour, but these turned out SO good. Will be making again for sure.
Rebekah Glass
0These are so delicious, moist and chocolate. Love! The frosting is good too
Maya | Wholesome Yum
0Thank you so much, Rebekah! Enjoy!
Gina
1Great lower carb option for something chocolaty and sweet!
Kathy
1I made these for our super bowl get-together and they were a big hit. I used erythritol / monkfruit sweetener that I had on hand. I used your suggestion of 1/4 cup heavy cream and 1/4 cup almond milk for a moister cupcake. I frosted them using your cream cheese frosting recipe. So great to have cupcakes on keto. Yummm! Love your recipes!
Rebekah G
1Great recipe! Very moist and chocolatey and the frosting goes perfectly with them. I’ve made these cupcakes several times and haven’t been disappointed yet!
Jessica
1These turned out great, with a nice moist chocolate flavor (I did the 2/3rds cup amount for the sweetener)! I made a basic chocolate whipped cream for the frosting which worked well with it. My non-keto family members were impressed as well. They said it was one of the best cupcakes they’ve ever had!
Angie
0I made these topped with the Keto cream cheese frosting for my diabetic daughter, thinking they would just be ok. They are delicious and only 7 carbs! She is so excited to feel good after eating a rich and delicious cupcake.
Wholesome Yum D
0I’m so glad these exceeded your expectations, Angie! It means so much to hear your daughter could enjoy a rich, delicious cupcake and feel good afterward. The keto cream cheese frosting is such a perfect pairing. I hope this recipe becomes a favorite for both of you!
Julie Robinson
0How many carbs do they have? My daughter can only have 20 g a day because of her cancer.
Maya | Wholesome Yum
0Hi Julie, These have 4.4 grams net carbs per serving, and the full macros are on the recipe card above. Best wishes to your daughter for remission, I’m so sorry. 🫶 I hope you both love these.
Amar
0The worst recipe, I followed all the instructions and it just turned so bad. It’s better to tell the people that if they didn’t use ingredients from you, they will never get the results that are shown in the videos. A waste of time and ingredients!
Maya | Wholesome Yum
0Hi Amar, If you didn’t use the ingredients in my recipe, then you didn’t make my recipe, you made something else. Sorry to hear yours didn’t turn out well. I do explain the impact of substitutions in my post above. I hope you get a chance to try my actual recipe as written.
Michelle
0Made these today for a fellowship dinner and they are delicious! I made some cream cheese frosting and added a tablespoon of sugar free peanut butter. 👍👍👍👍
Maya | Wholesome Yum
0I’m so glad you liked these keto cupcakes, Michelle! That frosting sounds great.
Holly
0Made this chocolate cupcakes today for a birthday. They are delicious!!! Everyone in my family loved them. I made them with an egg substitute and put your cream cheese frosting on them. They came out perfect. Will definitely make them again ??
Arag
0I love the flavor of these cupcakes. They are so delicious. I did 2 1/4 cup of almond flour and 1/4 cup of cocoa powder instead so I don’t get the bitter flavor of the cocoa powder. One issue I had is that once I refrigerated them they were not moist nor soft from the inside. They are a little hard even after leaving them at room temperature. What can I add for this? I thought to use coconut oil instead of butter to make them moist but then that will add coconut flavor to the cupcake. I also made your chocolate cake and it was very delicious, but the same thing happened with that too – it became hard once refrigerated and it wasn’t soft even after leaving it at room temperature. Thank you!
Alyssa
0Has anyone made these at high altitude? Any modifications needed?
Wholesome Yum D
0Hi Alyssa, I don’t live at a high altitude, so I can’t say for sure if any modifications are needed.
Tina
0This recipe is fabulous!!!! I just made a batch and they are delicious!!! I feel naughty like I’m eating cupcakes that I shouldn’t! This has been the best recipe I have found yet, and I have tried many! I don’t eat this way for weight-loss, I have health issues that have been cured by eliminating processed carbs and sugars, so this is wonderful for me! Thank you! : )
Shelby
0I just HAD to make these cupcakes and they didn’t disappoint! They’re so light and perfectly rich.
Addison
0These chocolate cupcakes were so moist and delicious! I loved the rich and decadent chocolaty flavor.
Viktoria
0My whole family enjoyed them and couldn’t believe that the were low carb and sugar free. The best recipe ever.
Fritzi Wellman
0I haven’t made this yet because of the almond milk. Can anything be substituted? Almonds require way too much water, which is becoming endangered.
Wholesome Yum D
0Hi Fritzi, You can use any other kind of milk.
Kimberly
0Hello, I am allergic to almonds, which flour substitute would you recommend for baking items?
Wholesome Yum D
0Hi Kimberly, Usually, Sunflower Flour is a good substitute for almond flour.
Shilpa
0These keto cupcakes were delicious. I loved the texture and they were perfectly moist.
Brenda
0Can I use Stevia instead of monk frut?
Ana
0Can I use coconut oil instead of butter? Don’t have butter right now.
Wholesome Yum D
0Hi Ana, Yes that would work.
G
0Can you use avacado oil instead of butter
Maya | Wholesome Yum
0Likely yes, but your cupcakes will be more dense.
Wholesome Yum D
0Hi Brenda, The result will be more dry using stevia instead of Besti, but if you still want to do that, use the conversion chart in my keto sweetener guide to make sure you are using the correct amount.
Diana
0This cupcake was extremely dry and lack flavor… I had made other keto cupcake recipes and they were great … very disappointed.
Wholesome Yum D
0Hi Diana, Sorry this recipe didn’t meet your expectation. If you wish to add more moisture, you can split the liquid to add more fat. Try 1/4 cup almond milk and 1/4 cup heavy whipping cream. Also, be sure to check for doneness. They may have been done baking before you pulled them from the oven. It can be difficult to visually see doneness in chocolate baked goods.
Angelica
0I love this recipe, but I am curious if it is possible to replace some of the butter with avocado in the cupcake portion?
Wholesome Yum D
0Hi Angelica, I have never replaced the butter with avocado, I recommend coconut oil in place of butter.