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These zucchini pizza boats are a delicious way to enjoy pizza flavors with a healthy zucchini “boat” instead of the crust. (You can also make a zucchini pizza crust for a more authentic feel, or zucchini pizza bites for fun appetizers, but the boats are even easier.) Prep the zucchini pizza recipe in just 10 minutes, bake in 20, and this simple meal is ready to eat!
Zucchini boats are a delicious way to enjoy zucchini season! After you make the pizza version, be sure to also try sausage stuffed zucchini and buffalo chicken zucchini boats.
Why You’ll Love This Pizza Boat Recipe
- Classic pizza flavor
- Saucy and cheesy texture
- Just 10 minutes prep
- A lighter way to enjoy pizza
- All the pizza flavor, with a veggie boost!

Zucchini Pizza Boats Ingredients
This section explains how to choose the best ingredients for healthy zucchini pizza boats, what each one does in the recipe, and substitution options. For measurements, see the recipe card below.
- Zucchini – Look for dark green zucchini that doesn’t have any indents or bruising. You can also use yellow summer squash, like I do for these squash boats.
- Olive oil – Use your favorite olive oil for classic Italian flavor, but avocado oil will also work.
- Sea salt & black pepper
- Marinara sauce – Make sure to use a sugar-free marinara sauce, many versions are made with added sugars.
- Mini pepperoni slices – Use the mini pepperoni if you can find it, otherwise large slices will work if you cut them into quarters.
- Mozzarella cheese – I use pre-shredded mozzarella cheese for convenience, but you can shred it yourself if you like.

How To Make Zucchini Pizza Boats
This section shows how to make baked zucchini pizza boats with step-by-step photos and details about the technique, to help you visualize it. For full instructions, including amounts and temperatures, see the recipe card below.
- Prep. Slice zucchini lengthwise and scoop out some of the center with a melon baller to form a well.
- Roast. Drizzle with olive oil and season with sea salt and black pepper. Roast zucchini until soft.
- Dry. When zucchini is done roasting, pat dry with a paper towel to remove moisture.


- Assemble. Spread marinara inside each zucchini boat and top with mozzarella cheese and mini pepperoni slices.
- Bake. Bake and broil until cheese is melted and browned.

Variations
- Sauce swap – Try swapping the marinara with alfredo sauce or pesto sauce.
- Veggie pizza boats – Top the pizzas with bell peppers, sun-dried tomatoes, mushrooms, and onions.
- Meat lover’s – Add sausage and bacon, in addition to the pepperoni.
- Hawaiian – Top with Canadian bacon and pineapple tidbits, similar to my Hawaiian pizza bowls.
Storage Instructions
- To store: Store leftover pizza boats in the refrigerator for 3-4 days.
- To meal prep: Prep and bake zucchini boats then assemble and bake when you are ready to serve them.
- To reheat: Reheat boats in a 350 degree F oven for best results.
- To freeze: Freeze pizza boats for 2-3 months. Keep in mind the zucchini may be a bit mushier after thawing.

What To Serve With Zucchini Pizzas
Serve this baked zucchini pizza recipe with a simple salad or veggie:
More Healthy Pizza Recipes
If you like this zucchini pizza low carb recipe, you might also enjoy these other healthy pizza options:
Tools To Make Zucchini Pizza Boats
- Melon Baller – Use this to easily scoop out the zucchini seeds.
- Baking Sheet – The best baking sheets I’ve ever used.
Zucchini Pizza Boats Recipe
Zucchini Pizza Boats Recipe
Make low carb zucchini pizza boats when pizza cravings hit! This healthy, easy zucchini pizza recipe is ready in just 30 minutes.
Recipe Video
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Ingredients
Tap underlined ingredients to see where to get them. Please turn Safari reader mode OFF to view ingredients.
Instructions
Tap on the times in the instructions below to start a kitchen timer while you cook.
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Preheat the oven to 400 degrees F (204 degrees C). Line a baking sheet with parchment paper.
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Slice the zucchini lengthwise. Use a spoon or melon baller to scoop out some of the centers of the zucchini to make wells.
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Place the zucchini onto the baking sheet, cut side up. Drizzle with olive oil and sprinkle with sea salt and black pepper.
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Roast the zucchini in the oven for about 15-20 minutes, until soft.
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When the zucchini are done roasting, use paper towels to pat any moisture from the wells.
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Spread 2 tablespoons (29.5 milliliters) of marinara inside each zucchini boat. Then top with mozzarella cheese and mini pepperoni slices.
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Bake for 5 minutes. Then, broil for about 3-5 minutes, until the cheese is melted and browned.
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Recipe Notes
Serving size: 2 zucchini boats
Nutrition facts are provided as a courtesy. Have questions about calculations or why you got a different result? Please see our nutrition policy.
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14 Comments
Rhonda
0We loved this one too, fixing to make it again🌻
Cheryl Wilbourn
0I wasn’t sure about making these when I reviewed the recipe, but I needed to use up some zucchini and I decided to go for it. Well, I’m glad I did! These were excellent. Easy to put together, healthy and my husband LOVED them. Thank you so much for a kick butt meal.
Paula
0I loved how these turned out. They were so tasty.
Natalie
0Fantastic lunch idea. Looks delicious and healthy. I’m making this today. Thanks for another wonderful recipe!
Amy L Huntley
0Now this is a pizza that I can feel good about eating. I have so much zucchini in my garden and this is the perfect way to use it up.
Kristyn
0This makes me so happy!! I love pizza & I also want to eat healthier, so now I can have both! I love the zucchini as the crust!
Cindy
0These were really yummy and fun! My kids loved them.
Jamie
0So delicious! Perfect way to use up all my zucchini!
Natalie
0No missing the dough here!! The zucchini is a great & delicious idea!! Way healthier too!
Raquel
0These were so easy and a delicious healthy dinner!
Jessica Burgess
0I needed a way to use up all of our zucchini from the garden and this was SO good. So glad I tried it!
Jennifer
0This recipe has seriously become a new favorite in our home!! So good, so flavorful and love that it’s healthier!
Beth
0What a great way to enjoy pizza, but healthier! We love how easy and delicious these were! Such a hit here and we’ll definitely make these again! Tasty and just the perfect lunch for today!
Toni
0It is so easy to make!! Thanks for the recipe!